BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014D07SP1|AL426682
(738 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig684 1426 0.0
>3x_Contig684
Length = 2183
Score = 1426 bits (714), Expect = 0.0
Identities = 728/738 (98%)
Strand = Plus / Plus
Query: 1 atcagttttaaagtcagttgatttactatcatttgtacaaaccctaccgaatgacttgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 atcagttttaaagtcagttgatttactatcatttgtacaaaccctaccgaatgacttgaa 590
Query: 61 tacgcgcgttcatgatgggttaatgtccggaggtcaagcccaacgattatctatcgcccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tacgcgcgttcatgatgggttaatgtccggaggtcaagcccaacgattatctatcgcccg 650
Query: 121 cacgttgttacgccagccgaaaatcatcatactagatgaatgcacatctgcactggatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 cacgttgttacgccagccgaaaatcatcatactagatgaatgcacatctgcactggatgc 710
Query: 181 agctaattcatttgcmattgcagagctcatcaggactgttctgaagaatgttacggtgat 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 agctaattcatttgcaattgcagagctcatcaggactgttctgaagaatgttacggtgat 770
Query: 241 tgttattactcattcagagcaattgatgcaaatttgcgatagggttcttgttttgaaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 tgttattactcattcagagcaattgatgcaaatttgcgatagggttcttgttttgaaaaa 830
Query: 301 agggaaagttaaagaagagggatcctatgcagagctcttcgaatctagaggcgaactata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 agggaaagttaaagaagagggatcctatgcagagctcttcgaatctagaggcgaactata 890
Query: 361 ccggatagtttcgtgcactagatattmacagaggattttcaatmacgattgattcacatg 420
|||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||
Sbjct: 891 ccggatagtttcgtgcactagatattaacagaggattttaaataacgattgattcacatg 950
Query: 421 tatgatttcttctaagtcagtttatmtcattmagcctagcatcatagagatagaattacg 480
||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 951 tatgatttcttctaagtaagtttatatcattaagcctagcatcatagagatagaattacg 1010
Query: 481 aatttacatctggtatcagacaaaattmgaatcattacmaatggacggtgacatatggma 540
||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |
Sbjct: 1011 aatttacatctggtatcagacaaaattagaatcattacaaatggacggtgacatatggaa 1070
Query: 541 cctccacgtcttcaccttccttatcttcacaacagaattccaaaatcatggtcttaacgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 cctccacgtcttcaccttccttatcttcacaacagaattccaaaatcatggtcttaacgt 1130
Query: 601 gactgaggatttccttcttcgtgactaattttacaacctcagttattggaagatccattc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 gactgaggatttccttcttcgtgactaattttacaacctcagttattggaagatccattc 1190
Query: 661 tatcctttagtttttttggagggaagaatgatgcgtatagtaaagaaacatcgtaggaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 tatcctttagtttttttggagggaagaatgatgcgtatagtaaagaaacatcgtaggaga 1250
Query: 721 ccattgtaatttccaatc 738
||||||||||||||||||
Sbjct: 1251 ccattgtaatttccaatc 1268
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4512
Number of Sequences: 1807
Number of extensions: 4512
Number of successful extensions: 99
Number of sequences better than 1.0e-20: 1
length of query: 738
length of database: 10,358,551
effective HSP length: 16
effective length of query: 722
effective length of database: 10,329,639
effective search space: 7457999358
effective search space used: 7457999358
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)